PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY35827.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 243aa MW: 27466 Da PI: 6.7105

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY35827.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	112.9	3.5e-35	39	165	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 +GfrF+P++e ++ + L+kk + +++ ++ik++ di+++ePwdL +k+++e++ +yfF+k ky++++r++r t++gyWk tg+ ++++ ++ GAY35827.1 39 MGFRFQPSNEKII-CLLEKKRLNPHFSH-HTIKDIdDICSLEPWDLAgaSKTESEDRVCYFFCKPCYKYKESTRAHRRTNAGYWKVTGRGSKIKT-RNG 134 7**********.78999999999888.77999******8533777788899*******************************9.888 PP NAM 99 lvglkktLvfy.kgrapkgektdWvmheyrl 128 l g+kk+L+fy +g a+k kt Wvmhey++ GAY35827.1 135 LSGIKKILTFYyHGPASKKAKTGWVMHEYHV 165 9****9978899999********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MESHGGFRSL PTVEEVVTTL ILLCAALYSQ LKSEMESLMG FRFQPSNEKI ICLLEKKRLN 60 PHFSHHTIKD IDDICSLEPW DLAGASKTES EDRVCYFFCK PCYKYKESTR AHRRTNAGYW 120 KVTGRGSKIK TRNGLSGIKK ILTFYYHGPA SKKAKTGWVM HEYHVNDDPS YKDLLVDQIS 180 MKLRSDGGAS TYAEDSSDPN NIAYIDAWLD EPLEAGRAST LAEDSSDTNN TAYMDAWING 240 LLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.1	3e-29	NAC family protein