PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY35952.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NF-YB
Protein Properties Length: 177aa    MW: 19660.6 Da    PI: 5.1473
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY35952.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB170.81.6e-5320115297
       NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 
                 +eq+r+lPianv+rimk++lPanakisk+aket+qecvsefisf+tseas+kc++e+rkt+ngdd++wal+tlGf+dy+ p++ yl+kyrelege+
  GAY35952.1  20 KEQERLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKTVNGDDICWALGTLGFDDYAGPIRRYLHKYRELEGER 115
                 89*******************************************************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MVDNTGAAGA GASSDDGGIK EQERLLPIAN VGRIMKQILP ANAKISKEAK ETMQECVSEF  60
ISFITSEASE KCRKERRKTV NGDDICWALG TLGFDDYAGP IRRYLHKYRE LEGERANQQD  120
KASNSNSNIN INEEREEPAG SSYGADDEQI TRNQALASIS FKSNVNERSN SFNSRRY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47810.13e-60NF-YB family protein