PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY35971.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

MYB_related

Protein Properties

Length: 1114aa MW: 124448 Da PI: 8.6757

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY35971.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	35.5	2.4e-11	46	81	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W++eE e++++a +++G++ Wk+Ia+ + +Rt++++ GAY35971.1 46 QWSKEELERFYEAYRKYGKD-WKKIAAAVR-NRTAEMV 81 6***************99.*****.*9976 PP

Sequence ? help Back to Top
Protein Sequence Length: 1114 aa Download sequence
MAPTRRSKSV NKRVAYTSEV ASKKKAENAD RSGKRKRKLS DMLGPQWSKE ELERFYEAYR 60 KYGKDWKKIA AAVRNRTAEM VEALFTMNRA YLSLPEGTAS VVGLIAMMTD HYGILAGSDG 120 EQESDEATGS SQKSQKCAGG KFQNPPPKGS DGPSPDLLNF QSAAPNYGCL SLLKKRRSGS 180 RPRAVAKRTP RVPVSYSYDK DNTEKYISPI KQGLKPRLGS IDDDVAHEIA LALTEASQRG 240 GSLLVSQTPK RKRGKPSPVQ KGSRTCDVSE MNSSKPYGSE MDEDGRELSL GSTDADNGYY 300 SRDKIYLMDA ETADTIEIQQ KGKRYHSKKL KQEESVSNHL DDIKEACSGT EEGQDMVVTK 360 GKFAMEIADE KNSTSYSKGS KKRSKKVLFK RDESSEFDAL QTLADLSLMM PETTADTELS 420 LQLKEEKPEA VNESKLKGNR SSTGVKDTAI KTSKLGKDCT DDVSVIPESE EGNHLTNSGN 480 RTKRQKFLPI KLRMDATEEL KKFISKGKRS LSASQSKHGK LVKPPEHTSS TDHEKEGNNS 540 ASSTAHVRTA NQVNLPTKVR SRRKMNMRKL LIERDKMSSE DILKSSEDIL NDHNRTNSSF 600 FDRAIKQKEQ LSNCLSWYQV RVWCVCEWFY STIDYPWFAK REFVEYLDHV GLSHVPRLTR 660 VEWGVIRSSL GRPRRFSEQF LKEEKEKLNQ YRESVRNHYS ELRSGTKEGL PTDLARPLYV 720 GQRIIAVHPR TREICDGSVL TVEHSRYKVQ FDKRELGIEF VQDIDCMPLN PLENMPASLT 780 RPNVAFGKFM DNFTELQMNG QPRERDIEGY MKFTPCENLE TAYAPSHISP STNYPINNLL 840 QQHKGVSYTD SEVHVGSTGQ AKEEDVLALS HLRHALDKKV LHLVASALFC LRQRNTYQGN 900 TCLTGLKPMS GLGNLGGGLP NSFDHSAYQT PESGPHVVEV VESSRSKAQK MVDVALQALS 960 SLEKEGNGIE RIEEAMDYVN NKLAGNDSGM PSIRLSTSAD LVHSSRNSQD QQLETHTTNL 1020 LANSRAPDST LNNSSDENSA HIPLELIAHC VAALFMIQRC TERDFPPADV ALVLDSAVTS 1080 LQPCCSQNLP VYAEIQKCMG IIRNQILALI PTST

Sequence ? help Back to Top

Protein Sequence Length: 1114 aa Download sequence

MAPTRRSKSV NKRVAYTSEV ASKKKAENAD RSGKRKRKLS DMLGPQWSKE ELERFYEAYR  60
KYGKDWKKIA AAVRNRTAEM VEALFTMNRA YLSLPEGTAS VVGLIAMMTD HYGILAGSDG  120
EQESDEATGS SQKSQKCAGG KFQNPPPKGS DGPSPDLLNF QSAAPNYGCL SLLKKRRSGS  180
RPRAVAKRTP RVPVSYSYDK DNTEKYISPI KQGLKPRLGS IDDDVAHEIA LALTEASQRG  240
GSLLVSQTPK RKRGKPSPVQ KGSRTCDVSE MNSSKPYGSE MDEDGRELSL GSTDADNGYY  300
SRDKIYLMDA ETADTIEIQQ KGKRYHSKKL KQEESVSNHL DDIKEACSGT EEGQDMVVTK  360
GKFAMEIADE KNSTSYSKGS KKRSKKVLFK RDESSEFDAL QTLADLSLMM PETTADTELS  420
LQLKEEKPEA VNESKLKGNR SSTGVKDTAI KTSKLGKDCT DDVSVIPESE EGNHLTNSGN  480
RTKRQKFLPI KLRMDATEEL KKFISKGKRS LSASQSKHGK LVKPPEHTSS TDHEKEGNNS  540
ASSTAHVRTA NQVNLPTKVR SRRKMNMRKL LIERDKMSSE DILKSSEDIL NDHNRTNSSF  600
FDRAIKQKEQ LSNCLSWYQV RVWCVCEWFY STIDYPWFAK REFVEYLDHV GLSHVPRLTR  660
VEWGVIRSSL GRPRRFSEQF LKEEKEKLNQ YRESVRNHYS ELRSGTKEGL PTDLARPLYV  720
GQRIIAVHPR TREICDGSVL TVEHSRYKVQ FDKRELGIEF VQDIDCMPLN PLENMPASLT  780
RPNVAFGKFM DNFTELQMNG QPRERDIEGY MKFTPCENLE TAYAPSHISP STNYPINNLL  840
QQHKGVSYTD SEVHVGSTGQ AKEEDVLALS HLRHALDKKV LHLVASALFC LRQRNTYQGN  900
TCLTGLKPMS GLGNLGGGLP NSFDHSAYQT PESGPHVVEV VESSRSKAQK MVDVALQALS  960
SLEKEGNGIE RIEEAMDYVN NKLAGNDSGM PSIRLSTSAD LVHSSRNSQD QQLETHTTNL  1020
LANSRAPDST LNNSSDENSA HIPLELIAHC VAALFMIQRC TERDFPPADV ALVLDSAVTS  1080
LQPCCSQNLP VYAEIQKCMG IIRNQILALI PTST

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	23	38	KKKAENADRSGKRKRK
2	249	256	PKRKRGKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein