PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY36011.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family C3H
Protein Properties Length: 182aa    MW: 18327.9 Da    PI: 8.2151
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY36011.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH31.52.9e-105780427
                ---SGGGGTS--TTTTT-SS-SSS CS
     zf-CCCH  4 elCrffartGtCkyGdrCkFaHgp 27
                ++C ++ + G Ck+G+ CkF H++
  GAY36011.1 57 APCTHYVQRGVCKFGPACKFDHPM 80
                79********************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
MKQLKNLWGT VCLGLAAAQV LVSLPVGVIS VAVGLSSCAI SLAPLELLTN LLKQGAAPCT  60
HYVQRGVCKF GPACKFDHPM GMLSYSPSAS SLADMPVAPY PVGSSIGTLA PSSASSDLRP  120
ELISGSSKDS VSTRMSSSVS ISSGSVGSIL SKSGPVPHSS MQQSGQSSGP STADDSSAEA  180
RT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47850.24e-20C3H family protein