PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY36249.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 432aa    MW: 47023.1 Da    PI: 6.7895
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY36249.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.31.7e-174897255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                +y+GVr+++ +gr++AeIrdp     +  r +lg+f+taeeAa a++ a+++++g
  GAY36249.1 48 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAACAYDCAARAMRG 97
                59*******.**********93....35999**********************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 432 aa     Download sequence    
MEEALRRLNG MPQMPESETS KKNTSTTSNS NKRSLKETGG NVSGTTMRYR GVRRRPWGRY  60
AAEIRDPQSK ERRWLGTFDT AEEAACAYDC AARAMRGMKA RTNFVYPAVA TEAPPHHFIP  120
PFNFSKQSQP SVRAFHTARP FMNPPSFANP VPEEKNSALN LLLLRDLLSN SSSSSSTSFY  180
TPTTAAAAAA PPPPPPHQPL YSYDQQLPFI SNNSSSSPTT TSASFSSGTG AFPMNPTYNH  240
QQQGLHNTTG TTAATVVSST NATKLVDDHM EFFPQEPSNS GLLQEIIQGF FPEPTSKSNK  300
SCDDDFTKPS SNDYCTQAMN SITAPLVSDM SVNMKRASGI KVEPSAVGGF YFDSQGHVGS  360
VGGGGQPSLQ NEFGNFNEVI TGSQFQSQAV LYGNNELPLN LPLCPESISD DVFQFHQYPE  420
LMSAFTARVQ NA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.12e-14ERF family protein