PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY36321.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

YABBY

Protein Properties

Length: 203aa MW: 23567.4 Da PI: 10.1007

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY36321.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	108.3	1.4e-33	41	137	70	168
YABBY 70 elleelkveeenlksnvekeesastsvsseklsenedeevprvpp..virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPki 166 e +ee ++ee + +++ ++ s+s +s s+ne+e++ v + v++PPe+rqr+Psaynrfikeei+r+k++nP+++h+eafs+aaknWa P+i GAY36321.1 41 EPKEEFRKEEVQADQKAFNRFSPSILTS----SDNEEEDTGSVINhvVNKPPERRQRAPSAYNRFIKEEIRRLKTENPNMAHKEAFSTAAKNWAQCPPI 135 2223333333333333333333333333....4444444444433349*************************************************99 PP YABBY 167 hf 168 + GAY36321.1 136 QH 137 65 PP

Sequence ? help Back to Top
Protein Sequence Length: 203 aa Download sequence
MLALRAVSSE VKNKHERRSH IMMKASFVPL HLLASFSHDD EPKEEFRKEE VQADQKAFNR 60 FSPSILTSSD NEEEDTGSVI NHVVNKPPER RQRAPSAYNR FIKEEIRRLK TENPNMAHKE 120 AFSTAAKNWA QCPPIQHKGD GESCGGQEEE KRAWNFEATD RVHVQGNGFR ERKAPRHSFR 180 ARKMLLEMRF EHFTSSSSRR VSH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23420.1	1e-38	YABBY family protein