PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY36365.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

bHLH

Protein Properties

Length: 461aa MW: 51777.9 Da PI: 6.6292

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY36365.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.3	5e-12	275	322	2	54
HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 r+++ + Er+RR++++++++ Lr l+Pk + K++ a+iL A eYIk+L GAY36365.1 275 RAKNLITERNRRNKLKDGLFALRALVPKiS------KMDRAAILGDAAEYIKEL 322 6777899*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 461 aa Download sequence
MRDLEKAVEW LRPFVDSKAW DYCVVWKLGD DPSSGGVGGG FEYVKVKEES GEEQKFSFCR 60 DAHLKHSART KACEALAQLP SFMDLYSGIH GEVVITNQPK WISLANSSDS IASHQSNSTR 120 VLIPVFGGLI ELFAAKHISK DQNIIELVLA HCNTSIEQRV VPAGSSYDVG LDEKCLDILL 180 KENLQNFPSP LQLLTFVPGT QVLSAATRFN THPYNEGSSR GSNPSIEHPS FDSNYGYIAQ 240 NAPLMQPIGN SFAKRPKCKS HVFKEELGER HRLGRAKNLI TERNRRNKLK DGLFALRALV 300 PKISKMDRAA ILGDAAEYIK ELLQEVDKLQ DELKENEDCE KDNEEMKSFK LDEIHEGTST 360 TYLPASEHNK SFPACGEKGK SEVRVEVNQI NDRDFLIKLL CEHERGGFVR LMEAINSLEL 420 QVIDANVTTF NGKVLNILRV QAHKENIRLK KLRETLIELT G

Sequence ? help Back to Top

Protein Sequence Length: 461 aa Download sequence

MRDLEKAVEW LRPFVDSKAW DYCVVWKLGD DPSSGGVGGG FEYVKVKEES GEEQKFSFCR  60
DAHLKHSART KACEALAQLP SFMDLYSGIH GEVVITNQPK WISLANSSDS IASHQSNSTR  120
VLIPVFGGLI ELFAAKHISK DQNIIELVLA HCNTSIEQRV VPAGSSYDVG LDEKCLDILL  180
KENLQNFPSP LQLLTFVPGT QVLSAATRFN THPYNEGSSR GSNPSIEHPS FDSNYGYIAQ  240
NAPLMQPIGN SFAKRPKCKS HVFKEELGER HRLGRAKNLI TERNRRNKLK DGLFALRALV  300
PKISKMDRAA ILGDAAEYIK ELLQEVDKLQ DELKENEDCE KDNEEMKSFK LDEIHEGTST  360
TYLPASEHNK SFPACGEKGK SEVRVEVNQI NDRDFLIKLL CEHERGGFVR LMEAINSLEL  420
QVIDANVTTF NGKVLNILRV QAHKENIRLK KLRETLIELT G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16910.1	8e-72	bHLH family protein