PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY36376.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB
Protein Properties Length: 217aa    MW: 25414.7 Da    PI: 7.9653
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY36376.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.25.8e-16956148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g WT+eEd +l+++++ +G g+W++I +  g++R++k+c++rw++yl
       GAY36376.1  9 KGLWTQEEDRILLEYIRVHGRGRWNRIHKVTGLKRCGKSCRLRWLNYL 56
                     678*******************************************97 PP
2Myb_DNA-binding57.72.7e-1863107248
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      g +T+eE+ l+++++ +lG++ W++Ia +++ gRt++q+k++w+++l
       GAY36376.1  63 GEFTEEEENLIIRLHDLLGNR-WSLIAGRVP-GRTDNQVKNHWNTHL 107
                      78*******************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MKAENEYKKG LWTQEEDRIL LEYIRVHGRG RWNRIHKVTG LKRCGKSCRL RWLNYLSPNV  60
KHGEFTEEEE NLIIRLHDLL GNRWSLIAGR VPGRTDNQVK NHWNTHLCKK LGINKKQKKK  120
FVSSSKTQAQ TQSSRIIKDD NGLTHDNLNF EHLQDSEMAL DQEPGDRKKS NEEAESINHH  180
CNESLLLPTE DDFLNLCSPI LLEFLEGQPL DLMWHNN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1109120KKLGINKKQKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14750.11e-60MYB family protein