PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY36612.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 93aa    MW: 10447.8 Da    PI: 8.5213
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY36612.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH309.7e-1021601554
                HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                +i +  ++L++l+P++ + +s K+s + iL+++++YI+sL
  GAY36612.1 21 QIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSL 60
                6777889********779********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 93 aa     Download sequence    
MSSRRSRSRQ SSGVSRISDD QIGDLVSKLQ QLIPELRSRR SDKVSASKIL QETCDYIRSL  60
HREVDDLSDR LSELLASIDS NSAEAAIIRS LLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26945.11e-41bHLH family protein