PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY36797.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 249aa MW: 28140.8 Da PI: 9.332

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY36797.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	165.2	2.3e-51	14	138	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdeelvv+yLk+k+ + +l++ ++i+evd++k++PwdLp v +e yfFs+r+ ky++g+r+nrat sgyWkatg dk++ ++ +++ GAY36797.1 14 LPPGFRFHPTDEELVVQYLKRKIFACPLPA-SIIPEVDVCKSDPWDLPGDV---AQERYFFSTREAKYPNGNRSNRATGSGYWKATGLDKQIATSrGNQ 108 79**************************.89***********554...4699******************************9985677 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 vg+kktLvfy+g+ p+g++tdW+mheyrl GAY36797.1 109 IVGMKKTLVFYRGKPPHGSRTDWIMHEYRL 138 7*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 249 aa Download sequence
MEKINFMKNG VLRLPPGFRF HPTDEELVVQ YLKRKIFACP LPASIIPEVD VCKSDPWDLP 60 GDVAQERYFF STREAKYPNG NRSNRATGSG YWKATGLDKQ IATSRGNQIV GMKKTLVFYR 120 GKPPHGSRTD WIMHEYRLVT AANAPQKKNF AQTPAVATDN WVLCRIFLKK RGAKSEDEET 180 CTEIGGTRAN GPKPVFYDFM RKEERADLNL VPTSSSSGSS GVTEVSSNES DDHEESSCNS 240 FPYFRRKQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	1e-102	NAC family protein