PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY36822.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family B3
Protein Properties Length: 266aa    MW: 30590.9 Da    PI: 7.9772
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY36822.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B344.23.5e-1498199199
                 EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                 f+k+l++sdv++ gr+vlpkk ae++    +++ ++ + led   +++W++k+++  ++ +gr+++ ++++ F k   L+ gD ++ + +++ e++++v
  GAY36822.1  98 FEKQLKNSDVNAAGRIVLPKKLAETYlpPVNEKAGFWMHLEDmDFNKVWTFKFRFwpNN-RGRMYIFENTRAFIKRYCLELGDYIMVY-KDELEGSYLV 194
                 99*************************9666668899*****5556*******995333.44455566*****************999.3348888888 PP

                 EEE-S CS
          B3  95 kvfrk 99 
                 ++++k
  GAY36822.1 195 RARKK 199
                 88765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MATLLGIDEE ETVMIPSNAV NGVQVISQDH AEPAGAGCDC SRSRRFRRRV SRSCRPRYQR  60
VAADNPLVFN PRVNRLPVQP PPPPTVREIN PFLMRFLFEK QLKNSDVNAA GRIVLPKKLA  120
ETYLPPVNEK AGFWMHLEDM DFNKVWTFKF RFWPNNRGRM YIFENTRAFI KRYCLELGDY  180
IMVYKDELEG SYLVRARKKG NYVPVHDQSN QVDNNANFPS INLEELVRCG NNYPKDACEV  240
DTSDYAHLIL TPCCESLDFA PDPPLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26790.14e-37B3 family protein