PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY36988.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB
Protein Properties Length: 338aa    MW: 37961.5 Da    PI: 5.0848
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY36988.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.11.3e-152774148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W++eEd++l+++    G g+W+ Iar  g+ R++k+c++rw +yl
       GAY36988.1 27 KGLWSPEEDDKLIKYMLTNGQGCWSDIARNAGLQRCGKSCRLRWINYL 74
                     678*******************************************97 PP
2Myb_DNA-binding52.51.2e-1680124147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg+++++E+el+++++  lG++ W+ Ia++++ gRt++++k++w++ 
       GAY36988.1  80 RGAFSPQEEELIIHLHSILGNR-WSQIAARLP-GRTDNEIKNFWNST 124
                      89********************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MRKPDLMGKE RLVNGSNINA KANKLRKGLW SPEEDDKLIK YMLTNGQGCW SDIARNAGLQ  60
RCGKSCRLRW INYLRPDLKR GAFSPQEEEL IIHLHSILGN RWSQIAARLP GRTDNEIKNF  120
WNSTLKKILK TNPNAPTPSP NNSDSSEPRG VIAGIIPMPN DHDIMTMCMD SSSSSSTSIQ  180
TMVTSNNSQL IDPFSMLDTR YDMTSASCLF NNMPTCIAQV DHTGDGLFYE DYGILEPSKM  240
GLEGDLSLPP LESRSIEENN SNAAKNNHNY NVDLKGNNNN HYTNNSCFNN TIDQGIKVGD  300
MLGLENNWQG ENLRVGEWDL EGFMDNISSF PFLDFQVE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G08500.12e-69MYB family protein