PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY37001.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NF-YA

Protein Properties

Length: 353aa MW: 38572.2 Da PI: 9.5518

Description

NF-YA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY37001.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CBFB_NFYA	102.4	4.1e-32	149	205	1	58
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep+YVNaKQy++Il+RRq+Rak+e ekk+ +k+rkpylheSRh+hA+rR+Rg+gGrF GAY37001.1 149 EEPVYVNAKQYRGILRRRQSRAKAELEKKV-IKARKPYLHESRHQHAMRRARGCGGRF 205 69**************************.************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MMPAKPDENR QLDRGAQSVS QSAIYSQQPW WSGTGTGASL AEAAASKSSR EQPNGSVVNG 60 ATYSQDGING QEHAHLKHIP SSTPLTMGER LEQNSQMELV GHSIVLTSYP YTDPQHVGVI 120 TPYVPQVMIP PQLYGMHQAR MPLPLEMEEE PVYVNAKQYR GILRRRQSRA KAELEKKVIK 180 ARKPYLHESR HQHAMRRARG CGGRFLNTKQ LNDNAANSAE KGMNSGADGS KGSTNGTGSV 240 DSSIVQQERA MEENAHMEHT SSNSNSNNRS LVSMYNTSSG SVEGNFLGQQ TGSLQGNGAP 300 RGALPAKLEV YMPSISEWGN HHWCGGPQAI HSWLCKLVVA LGEMRKKNTG MKI

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MMPAKPDENR QLDRGAQSVS QSAIYSQQPW WSGTGTGASL AEAAASKSSR EQPNGSVVNG  60
ATYSQDGING QEHAHLKHIP SSTPLTMGER LEQNSQMELV GHSIVLTSYP YTDPQHVGVI  120
TPYVPQVMIP PQLYGMHQAR MPLPLEMEEE PVYVNAKQYR GILRRRQSRA KAELEKKVIK  180
ARKPYLHESR HQHAMRRARG CGGRFLNTKQ LNDNAANSAE KGMNSGADGS KGSTNGTGSV  240
DSSIVQQERA MEENAHMEHT SSNSNSNNRS LVSMYNTSSG SVEGNFLGQQ TGSLQGNGAP  300
RGALPAKLEV YMPSISEWGN HHWCGGPQAI HSWLCKLVVA LGEMRKKNTG MKI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G12840.2	7e-34	NF-YA family protein