PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY37259.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 211aa    MW: 24225.3 Da    PI: 4.6179
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY37259.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.89.1e-1458100754
                 HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                   Er+RR+++N++++ Lr+++P+ +      K++Ka+i + A++YI++L
  GAY37259.1  58 VSERNRRKKLNERLFALRSVVPNiS------KMDKASIIKDAIDYIQEL 100
                 57*********************66......****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MENLGEDYQQ EYQNYWETKM FLQNEEFDTW PLDEAFSGYY DSSSPDGAAS SAASKNIVSE  60
RNRRKKLNER LFALRSVVPN ISKMDKASII KDAIDYIQEL HEQEKRIRDE IMELESGKSK  120
KNFGFDFEQE LPVLLRPKKK KIDRFFDSAG SRTAPVEILE LKIITANITA VAGRLLKTAF  180
IEADEEEMDD LKIKIQTAIQ ALNDPSSPMS V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.11e-61bHLH family protein