PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY37260.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 186aa    MW: 21570.5 Da    PI: 5.4924
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY37260.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.27.3e-1458100754
                 HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                   Er+RR+++N++++ Lr+++P+ +      K++Ka+i + A++YI++L
  GAY37260.1  58 VSERNRRKKLNERLFALRSVVPNiS------KMDKASIIKDAIDYIQEL 100
                 57*********************66......****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MENLGEDYQQ EYQNYWETKM FLQNEEFDTW PLDEAFSGYY DSSSPDGAAS SAASKNIVSE  60
RNRRKKLNER LFALRSVVPN ISKMDKASII KDAIDYIQEL HEQEKRIRDE IMELESGKSK  120
KNFGFDFEQE LPVLLRPKKK KIDRFFDSAG SRTAPVEILE LKIITANITA VAGRLLKTAF  180
IEKLKF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.19e-52bHLH family protein