PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY37493.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

MYB

Protein Properties

Length: 251aa MW: 28599.1 Da PI: 9.3174

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY37493.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.1	1.3e-15	18	65	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W + Ed++l d++k +G g W+ I++ g++R++k+c++rw +yl GAY37493.1 18 RGAWKAVEDKILTDYIKAHGEGKWRHIPKAAGLKRCGKSCRLRWMNYL 65 89********************************************97 PP
2	Myb_DNA-binding	52.1	1.5e-16	71	114	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E++l ++++k+lG++ W++Ia +++ gRt++++k++w++ GAY37493.1 71 RGNFSKDEEDLVIRLHKLLGNR-WALIAGRLP-GRTDNDIKNYWNT 114 89******************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 251 aa Download sequence
MAGKRKTPCC SKGEGLNRGA WKAVEDKILT DYIKAHGEGK WRHIPKAAGL KRCGKSCRLR 60 WMNYLRPDIK RGNFSKDEED LVIRLHKLLG NRWALIAGRL PGRTDNDIKN YWNTKLSKRV 120 DANHHHHHQN RSKVEKKPKT RSSSGVVPRP QYKKTEKHDA AGGVADDDDD REAPILFDYV 180 PVQSQCSYGC KEEKSSGSDH EYTVEFDVGG KSLLDLLHAD LNNLDDFGHD IYNNRDNHII 240 QGSLQSDLGF W

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22640.1	1e-58	MYB family protein