PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY37496.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

MYB

Protein Properties

Length: 202aa MW: 23147.1 Da PI: 9.1742

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY37496.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	65.4	1e-20	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd++l++a++ +G++ Wk++a++ g++R++k+c++rw +yl GAY37496.1 15 RGAWTAEEDQKLAQAIEVHGPKKWKSVAAKAGLNRCGKSCRLRWMNYL 62 89********************************************97 PP
2	Myb_DNA-binding	50.1	6.2e-16	68	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + +E++l+++++k+lG++ W++Ia +++ gRt++++k++w+++l GAY37496.1 68 RGSISDQEEDLILRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 113 788899**************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 202 aa Download sequence
MVTVSSQCTK KEANRGAWTA EEDQKLAQAI EVHGPKKWKS VAAKAGLNRC GKSCRLRWMN 60 YLRPNIKRGS ISDQEEDLIL RLHKLLGNRW SLIAGRLPGR TDNEIKNYWN SHLSKKIKQN 120 EKPSRGSTAK DLELEISKGE EKGSTVQKRS GDLEGTFYAD GGSKLFSFVG DNKFFDCYND 180 EPLNLEWMSR FFEMDESWFD FA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13540.1	5e-57	MYB family protein