PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY37622.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 199aa    MW: 22082.5 Da    PI: 4.5644
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY37622.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2574.9e-181565155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                s+ykGVr +k +g++v+eIr p++   r+r++lg+++tae+Aa+a +aa  +l+g
  GAY37622.1 15 SRYKGVRKRK-WGKYVSEIRLPNS---RARIWLGSYDTAEKAARAFDAALFCLRG 65
                79*****999.**********933...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MVKHVVEKPA ERSDSRYKGV RKRKWGKYVS EIRLPNSRAR IWLGSYDTAE KAARAFDAAL  60
FCLRGRSAKF NFPDNPPDIS GGRSLKPSEI QAVAAQFANS EPLRSQSPEQ SVSELQTEYL  120
SPSISEATVQ LDSDGVFDGS LLDLLTASSS SNYPSEYGIF PGFDDLSNDI FAPQLPAVDF  180
ADENFDGLLL NQDSFLWNF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11824KGVRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.13e-55ERF family protein