PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY38070.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family GRAS
Protein Properties Length: 697aa    MW: 78891.9 Da    PI: 6.586
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY38070.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS365.47.7e-1123246933374
        GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
                 +lL+ cA+av++ d++ a+ +L+++++++sp gd +qRla+yf+++L+ rla++ + +   l++s++s    +e+l+a+k+++  +P+ +++++++N++
  GAY38070.1 324 TLLTLCAQAVANYDQRTANDFLKQIRQHSSPFGDGIQRLAHYFANGLEVRLAGTRTPVQTHLASSRAS---AAEVLQAYKVYVSSCPFNRMTFFMTNRM 419
                 68999************************************************888888888877777...99************************** PP

        GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                 Il+ +e+++r+Hi+Df+i++G+QWp+L+q +++Rp+gpp++R+T+++ p++g   +e++eetg+rL+ + +++gvpfe+n+ +a+++++++le+L++++
  GAY38070.1 420 ILKLAEKATRIHIVDFGIGYGFQWPCLIQRISKRPGGPPKIRMTAIEFPQPGfkPAERVEETGHRLKCYSQRFGVPFEYNT-IAQKWQNIQLEDLKIDR 517
                 ***************************************************999***************************.7**************** PP

        GRAS 199 gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnv 297
                 +E ++Vn+ +++ +l+d++v ++s+rd+vL+l+k+++P+++++   +  +n++ Fl rf eal ++s++fd++e+++pre++ r+  Ere+ g++++nv
  GAY38070.1 518 EEITVVNCLYRMRNLPDDTVVINSPRDAVLELIKKINPDIFIHGVVNGTYNAPFFLPRFREALFHFSTFFDMFESTVPREDQGRMIFEREIHGKDAMNV 616
                 *************************************************************************************************** PP

        GRAS 298 vacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 +aceg er+er et+++W++r  +aGFk+++l++++ k++++l++      + ++e  +++++gWk+r  +++S+W+
  GAY38070.1 617 IACEGIERVERPETYKQWQARNLRAGFKQLELDKDILKTIRTLVKSNFHPDFVIDEAGEWMLQGWKGRLAYALSFWK 693
                 ********************************************9998888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 697 aa     Download sequence    
MKNPLQFDRG SVSTYLNRND VDKFKLKQSR EPIDPPLPPS ASLQNNQNPP SDSDSSSTMS  60
SYGDPADICE LSNTTLKFIS EILMEEDLEG KTCMLQDCLA LQAAEKSFYD VLGQKYPPSP  120
NQISPCSSRN SEILNDYCTS SSNSASISVS TSVNNLFEPI WMSNQGDSSS SITQTNLFNS  180
PESVLVPNLF STGNSFLLND NTAIINSTSD SAKSPEGEDR TYSSPYRSRG RKYDELEDSD  240
YLEEGRSNKQ SALSPHENEP LEMYDEVVLC KCENNKSTVC LIHGYVQNGS SGKLQQNGQP  300
KGSSSATTRS RRKGKKSEVV DLWTLLTLCA QAVANYDQRT ANDFLKQIRQ HSSPFGDGIQ  360
RLAHYFANGL EVRLAGTRTP VQTHLASSRA SAAEVLQAYK VYVSSCPFNR MTFFMTNRMI  420
LKLAEKATRI HIVDFGIGYG FQWPCLIQRI SKRPGGPPKI RMTAIEFPQP GFKPAERVEE  480
TGHRLKCYSQ RFGVPFEYNT IAQKWQNIQL EDLKIDREEI TVVNCLYRMR NLPDDTVVIN  540
SPRDAVLELI KKINPDIFIH GVVNGTYNAP FFLPRFREAL FHFSTFFDMF ESTVPREDQG  600
RMIFEREIHG KDAMNVIACE GIERVERPET YKQWQARNLR AGFKQLELDK DILKTIRTLV  660
KSNFHPDFVI DEAGEWMLQG WKGRLAYALS FWKPVQD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein