PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY38165.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family C2H2
Protein Properties Length: 153aa    MW: 16429.4 Da    PI: 9.5255
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY38165.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.10.00122648123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                + C+ C+k F++   L  H  +H
  GAY38165.1 26 FACKTCNKEFPSFQALGGHRASH 48
                78**********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    
MAAIDTANCL MLLSKVGETD QGKRVFACKT CNKEFPSFQA LGGHRASHKK PKLMTMASSG  60
EDFDQAQMPP ASPKKPKTHE CSICGLEFAI GQALGGHMRR HRAAAAMGAA ADGLVIRPLL  120
PLPVLKKSNS CKRVLCLDLN LMPTGDDLKL WVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28710.13e-34C2H2 family protein