PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY38212.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

WOX

Protein Properties

Length: 208aa MW: 24045.7 Da PI: 9.7582

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY38212.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	65.6	6.5e-21	7	66	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eql +Lee++++ r+p+a+++++++++l +++ ++V++WFqN++a+e++ GAY38212.1 7 TRWCPTPEQLMILEEMYRSgVRTPNASQIQHITAHLshfgKIEGKNVFYWFQNHKARERQ 66 8***************99************************************97 PP
2	Wus_type_Homeobox	121.6	3.2e-39	6	67	3	64
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +tRW+PtpeQ++iLee+y+sG+rtPn+++iq+ita+L+++Gkie+kNVfyWFQN+kaRerqk GAY38212.1 6 STRWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHKARERQK 67 79***********************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 208 aa Download sequence
MSPAGSTRWC PTPEQLMILE EMYRSGVRTP NASQIQHITA HLSHFGKIEG KNVFYWFQNH 60 KARERQKLRR KLGKQLQLQQ QQQIFQHHHH LQQCCQVPNH HQQLLHCSFQ SPPAGGSFSN 120 PAKVLTQGML TEDASTKTMS YTWKKGIQER VEMEKSLMGM YGRDWMMMVD VAPRSLQPCC 180 SKPPLRTLEL FPITATNLKE ECNSSKQN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28610.1	9e-37	WOX family protein