PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY38503.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB_related
Protein Properties Length: 324aa    MW: 35851.9 Da    PI: 9.6284
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY38503.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.44.9e-11536132
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg 32
                     +++WT+eE+e l+ +v+++G+g Wk I r  +
       GAY38503.1  5 KQKWTAEEEEALLAGVAKHGPGKWKNILRDPQ 36
                     79*************************99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MGNQKQKWTA EEEEALLAGV AKHGPGKWKN ILRDPQFAPS LTQRSNIDLK FSLHSGLYMG  60
HVWLMSTTYC IVMKFCADDV PGIMMQNTEA SASDYVEAGC HLDKWRNLSV SNAQQGSKDK  120
IRGPKLKTTV VAPLSNTPNS APAASLTRNV SSGAVMNDTS TSALDGKNGP KYNAMIFEAI  180
STLKDANGSD ISAIANFIEE RQEAPPNFRR LLSSRLRRLV SQGKLEKVRN CYKIRKETSI  240
GVKTPTPKQK DARLRPPRNS ALMTSREIVE EASITAAYRI AEAENKSFLA AEAFKEAERV  300
SKMAEDTDAM LQLVKEIYER CSFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17520.19e-74MYB_related family protein