PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY38539.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NAC
Protein Properties Length: 119aa    MW: 13902.8 Da    PI: 10.2504
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY38539.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM38.53.4e-1229043128
         NAM  43 ePwdLpkkvka....eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                 ePw++ k++ +    + +++yfF++ +kk+ +g+     + + +W+     k+v+s+ +++++  kk + + k ++p+  +  W+mhey+l
  GAY38539.1   2 EPWQIWKQFGGldleDGEDLYFFTRLKKKSVNGSMIDSRVGTRTWQGEDAGKAVVSRnSRKKIDSKKRFQYEKDKSPH--NGCWIMHEYSL 90 
                 89999753333333356689************998887778889****999999998667789********9777766..99*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 119 aa     Download sequence    
MEPWQIWKQF GGLDLEDGED LYFFTRLKKK SVNGSMIDSR VGTRTWQGED AGKAVVSRNS  60
RKKIDSKKRF QYEKDKSPHN GCWIMHEYSL NPSLLPQNLR SNDLILYRIR KNGEPAVAR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71930.12e-08NAC family protein