PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY38602.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

Dof

Protein Properties

Length: 250aa MW: 27087.8 Da PI: 8.5855

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY38602.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.3	3.9e-39	17	76	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++lkcprC+stntkfCyynny+lsqPr+fCk+CrryWt+GGalrn+P+Ggg+rk+++++ GAY38602.1 17 SEQLKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTRGGALRNIPIGGGTRKSNTKK 76 6899***************************************************98765 PP

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence
MQDPATFNPM KPHFPESEQL KCPRCESTNT KFCYYNNYNL SQPRHFCKNC RRYWTRGGAL 60 RNIPIGGGTR KSNTKKRQKP DPDPSRSNPT RKSQETANSQ SMLQAAATTS TSSQEPAVTL 120 PGAVARESGT EHDPRRLYGL PLDQDHKMLD ITGSFSSLLA SNGGLGSVLD GITPNGSGFK 180 MVQMGGFGEN FGSDQSLDLI SVRGSGSQNQ GNNNGGESFM QSGNNDSSCW SGGSNGWPDL 240 AIYTPSSNFQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51700.1	2e-41	Dof family protein