PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY38685.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ZF-HD
Protein Properties Length: 219aa    MW: 24907.2 Da    PI: 9.1589
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY38685.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer99.62.2e-314094257
  ZF-HD_dimer  2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57
                 + vrYkeClkNhAa++Gg a+DGCgEfmps geeg++++lkC+AC+CHRnFHR+e 
   GAY38685.1 40 KVVRYKECLKNHAAAIGGSATDGCGEFMPS-GEEGSIESLKCSACNCHRNFHRKEI 94
                 679**************************9.999********************96 PP
2Homeobox15.23.8e-05152207152
                 TT--SS--HHHHHHHHHHHH....HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHH CS
    Homeobox   1 rrkRttftkeqleeLeelFe....knrypsaeereeLAkklgLterqVkvWFqNrR 52 
                 +r Rt+ft+eq e + ++ e    + ++++++  ++  +++g++ r+ kvW +N +
  GAY38685.1 152 KRFRTKFTQEQKEKMLRFAEradwRIQKLDESVVQQFCQEIGIKRRVLKVWMHNNK 207
                 789************98777777678****************************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MNSSSSPPKE RQFIVLVNSS NSNGNIVVQD HEEQKNPCKK VVRYKECLKN HAAAIGGSAT  60
DGCGEFMPSG EEGSIESLKC SACNCHRNFH RKEIGCDAHY HHLHQQAMMM LSGKSGSAHS  120
ASDEKDEGRG VVVGRPAPAD DDDHQKRMMM RKRFRTKFTQ EQKEKMLRFA ERADWRIQKL  180
DESVVQQFCQ EIGIKRRVLK VWMHNNKHSF AKKNSSSFD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02540.11e-58ZF-HD family protein