PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY38742.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB_related
Protein Properties Length: 184aa    MW: 21138.2 Da    PI: 10.5851
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY38742.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.71.3e-18110157148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      +g+WT eEd +l++++  +G g+W++ ar+ g++Rt+k+c++rw++yl
       GAY38742.1 110 KGPWTVEEDFKLINYISTHGEGRWNRLARCAGLKRTGKSCRLRWLNYL 157
                      79********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
MYGFARFHKN CGANLSYAAS KTYPSNLETT ADANSNVGTG RLGSSICCSH GYLPNPLLEF  60
YPRRTRVTQF VHLRQPKLKK TEVKGRACRA NRNFKSSSTT ISEEDLDMRK GPWTVEEDFK  120
LINYISTHGE GRWNRLARCA GLKRTGKSCR LRWLNYLRPN VRLGKITLEE QLLILELHSR  180
WGNR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49620.13e-41MYB family protein