PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY38767.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ZF-HD
Protein Properties Length: 247aa    MW: 26985 Da    PI: 6.8306
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY38767.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer101.84.7e-3248103359
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                  k+rY+eClkNhA+ +Ggha+DGCgEfm++ g+egt ++lkCaAC+CHRnFHR+ev++
   GAY38767.1  48 KARYRECLKNHAVGIGGHALDGCGEFMAA-GDEGTLDGLKCAACNCHRNFHRKEVDS 103
                  789*************************9.999*********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MEFEDHEEQE EEMGLPAGYD SSLGNSSQVR MGSSGGQATA EAAHPGRKAR YRECLKNHAV  60
GIGGHALDGC GEFMAAGDEG TLDGLKCAAC NCHRNFHRKE VDSSVVTPMA AGVPAAGGGE  120
VFFHPSQVPQ FTPYYRTPAG YLHVAAHHRP LALPSTSGGG HSREDQEDAS NLGGSGGSRK  180
RFRTKFTPEQ KDRMLELAEK LGWRIQKHDE EVVQQFCNDT GVKRHVLKVW MHNNKHTLVL  240
RADTDHL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.11e-67ZF-HD family protein