PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY38820.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

Dof

Protein Properties

Length: 337aa MW: 36245 Da PI: 9.0264

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY38820.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	127.3	4.4e-40	33	93	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+alkcprCds ntkfCyynnysl+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknkk + GAY38820.1 33 QEQALKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKIK 93 5799******************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence
MSSENILTTQ AVMTKEENQN PAGNRKTAST RPQEQALKCP RCDSPNTKFC YYNNYSLTQP 60 RHFCKTCRRY WTKGGALRNV PIGGGCRKNK KIKSSSRLSV DSKDSSSSSE IGGFKFFHGL 120 SPAMDFQLGG LSFPRLNPSS AGICSQFSSF GDATSPSYFG LDPSASSANH PLTGFNYPLS 180 SVVANTFGGA VQEMGSLNVN SSLASSIESL SSINQDLHWR LQQQRLAMLF GGENQKETTV 240 ASAQLETQTQ KPQPILFQNL EISSKPQAPA VGNSRKEGAS GESTATEWFF GNSYAPVTAG 300 TPTTTSSGGN GGNDNTINNW NNGAQGWSDL HRYSGLP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65590.1	5e-54	Dof family protein