PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY38956.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB_related
Protein Properties Length: 296aa    MW: 32218.8 Da    PI: 8.4829
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY38956.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.92.7e-1489133347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky
       GAY38956.1  89 PWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKY 133
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MSGTGDSSAV NGGGGEIMLF GVRVVVDSMR KSVSLNNLSQ YEQPQDNSSN CNNNNNNKDD  60
VAAAGYASAD DGVHNNSSRA SRERKRGVPW TEEEHKLFLL GLQKVGKGDW RGISRNFVKT  120
RTPTQVASHA QKYFLRRSNL NRRRRRSSLF DITTDSVAAT PMEEELVDHQ DHNPSQSYPL  180
LPPTPAETSN KSGGFSMMPA LPVVLPVPIE NPMENLTLGQ NSQRTAGEAT RLIRPVPVPV  240
LPAAQPSSTV SDLNLNLNLA VDPPPLSQRE SSSRHSAFQV MQTFNNGDSN SIISVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19000.16e-59MYB_related family protein