PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY39045.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 92aa    MW: 10287.6 Da    PI: 5.0665
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY39045.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.22.9e-0816571455
                HHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH 14 driNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                d+iN+ + +Lr llP + + +++ +  +e+++++++YI+sLq
  GAY39045.1 16 DEINNLIMKLRPLLPRLNQRRNGTVPASEVVKETCNYIRSLQ 57
                78**************879**********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    
MSSRRTSSSA SKITEDEINN LIMKLRPLLP RLNQRRNGTV PASEVVKETC NYIRSLQSEA  60
DDLSERLSQL LGSTDSNGVD ITLIINLLQQ QD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26945.12e-16bHLH family protein