PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY39102.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NF-YC
Protein Properties Length: 116aa    MW: 12707.8 Da    PI: 10.2951
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY39102.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC106.81.3e-33201011898
       NF-YC  18 nhelPlarikkilk.adedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98 
                  h+lPlarikki+k + +dvkmis eaP+++skacelfi elt rsw  + + krrtl k d+a+av  tdifdfl+  v +
  GAY39102.1  20 THSLPLARIKKIMKkSGDDVKMISGEAPIVFSKACELFIEELTKRSWTMTMQGKRRTLLKDDVASAVIATDIFDFLLTLVSE 101
                 79***********825689*********************************************************988875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 116 aa     Download sequence    
MRQAGTYSGL LSKMSGRTGT HSLPLARIKK IMKKSGDDVK MISGEAPIVF SKACELFIEE  60
LTKRSWTMTM QGKRRTLLKD DVASAVIATD IFDFLLTLVS ESGNNINADA GQVNPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54830.36e-34NF-YC family protein