PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY39428.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

G2-like

Protein Properties

Length: 350aa MW: 38669 Da PI: 8.0724

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY39428.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.9	8.1e-32	145	198	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH++Fv+av+ LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ GAY39428.1 145 PRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRT 198 9****************************************************7 PP
2	Myb_DNA-binding	47.4	4.5e-15	146	197	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ +v+av++lGg+ t+k++ + m+ k +tl ++ks++q+y+ GAY39428.1 146 RMRWTTTLHAHFVHAVQLLGGHeraTPKSVLELMNvKDLTLAHVKSHLQMYR 197 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MFSSMNPLIR TASLSPMPDL SLQISPPSAS DCEANNNKEV RFDGLVRNSY AFYSDGGSTT 60 DSASSGSDLS HENRFYNPAE RSYNLGPSEP MLSLGFEMAD LCPPPPQQLP RTINHHQQYQ 120 PQIHGHEFKR NARMISGVKR SVRAPRMRWT TTLHAHFVHA VQLLGGHERA TPKSVLELMN 180 VKDLTLAHVK SHLQMYRTVK STDKGSGQGQ TDMGLNQRTG VVDLEGGLSC AKSDTNSSLH 240 PTPSSPQATS QQKRQRGSLP SMETNNRSIS NSGNAMTYSH FKANDTKGDG RKTAVHMSDN 300 NKVEVERLDS SSLTASDDKL LNLEFTLGRP SWQMDYADQS SNHELTLLHC

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MFSSMNPLIR TASLSPMPDL SLQISPPSAS DCEANNNKEV RFDGLVRNSY AFYSDGGSTT  60
DSASSGSDLS HENRFYNPAE RSYNLGPSEP MLSLGFEMAD LCPPPPQQLP RTINHHQQYQ  120
PQIHGHEFKR NARMISGVKR SVRAPRMRWT TTLHAHFVHA VQLLGGHERA TPKSVLELMN  180
VKDLTLAHVK SHLQMYRTVK STDKGSGQGQ TDMGLNQRTG VVDLEGGLSC AKSDTNSSLH  240
PTPSSPQATS QQKRQRGSLP SMETNNRSIS NSGNAMTYSH FKANDTKGDG RKTAVHMSDN  300
NKVEVERLDS SSLTASDDKL LNLEFTLGRP SWQMDYADQS SNHELTLLHC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42630.1	2e-70	G2-like family protein