PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY39453.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

MYB

Protein Properties

Length: 254aa MW: 28053.9 Da PI: 8.651

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY39453.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.9	1.1e-18	38	83	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd +l ++v+++G+++W++I+r++ gR++k+c++rw + GAY39453.1 38 KGPWSAEEDRILTRLVERYGPRNWSLISRYIK-GRSGKSCRLRWCNQ 83 79***************************9.*********985 PP
2	Myb_DNA-binding	52	1.7e-16	92	134	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++ Ed+ ++ a++++G++ W+tIar ++ gRt++ +k++w++ GAY39453.1 92 PFSPAEDDTILAAHARFGNR-WATIARLLP-GRTDNAVKNHWNST 134 79****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence
MEACSYSSTS SSESSSSESS LSGNNKTRRA THKPERIKGP WSAEEDRILT RLVERYGPRN 60 WSLISRYIKG RSGKSCRLRW CNQLSPSVAH RPFSPAEDDT ILAAHARFGN RWATIARLLP 120 GRTDNAVKNH WNSTLKRRTR EHPVQMQPHQ QQQLMDSVDN GGDNNNDNEN IGLGGFAVSG 180 SHHQQQQCMG LEDDALTALT LGPPGGSSSI NINDSSAERT ESLPAGFWDA MRGVIAREVR 240 DYMSSTLSGT SGFH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50060.1	1e-57	MYB family protein