PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY39496.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family B3
Protein Properties Length: 241aa    MW: 27424.8 Da    PI: 10.419
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY39496.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B353.93.2e-17128217198
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                 f+k +++s+v+   +l lp  f++++  +k ++  +tl de+g ++   +    ++ +  l++GWk F+ a+gL +gD +vF+l++++ f  +v ++r
  GAY39496.1 128 FIKPMLQSHVTGGFWLGLPGYFCRRNL-PK-RDEAITLIDEDGDEYPTVY--LPRKTG--LSGGWKAFAVAHGLVDGDALVFQLIRNTAF--KVYIIR 217
                 89*********************9994.33.5568***************..555544..*************************99999..888877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MVKAKPSYEE CRLKRVEENK KRMEALNLPM LCQALRKKPS IEPSHEKQVK PRTVKKQEDV  60
VLRRSSRVAN KPAPVYNGVT LVRVEIPRRI SSKRDLSNRV YASDEARARA VEKAEKLEAR  120
LGPEHPTFIK PMLQSHVTGG FWLGLPGYFC RRNLPKRDEA ITLIDEDGDE YPTVYLPRKT  180
GLSGGWKAFA VAHGLVDGDA LVFQLIRNTA FKVYIIRVNG SDQMKNLLNS KYQISEPVQS  240
I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.11e-65B3 family protein