PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY39572.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

FAR1

Protein Properties

Length: 154aa MW: 17507.1 Da PI: 9.9244

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY39572.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	53.1	1e-16	50	135	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 kfY++Y+++ GF v k +skk +g+++ +tf C +gk+++++++ + + + ++gC+ak+ +++gkw + +l+l+HnH l+ GAY39572.1 50 KFYKAYSRQEGFPVNKLTSKKG-SDGTVKYATFACGGSGKADSRSSN---ILKLKLVVKIGCEAKIGGCVKEEGKWILRTLNLQHNHGLS 135 6**************99987.8888************9988...99999********99999*************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 154 aa Download sequence
MCCRSRRKEE ASRSDRMENF KTEHVVEDVP LEKFEPTFGM LFDSYEEMFK FYKAYSRQEG 60 FPVNKLTSKK GSDGTVKYAT FACGGSGKAD SRSSNILKLK LVVKIGCEAK IGGCVKEEGK 120 WILRTLNLQH NHGLSSDKAR YFPCNRRISA SVKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76320.1	1e-11	FAR1 family protein