PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY39658.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NAC
Protein Properties Length: 160aa    MW: 18743.3 Da    PI: 9.6263
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY39658.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM176.47.9e-55141421128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                 +ppGfrFhPt+eelv +yLk+k+++ k++l +vi ++d+yk+ePwd+++     + e++ewyfFs++d+ky+tg+r+nrat++g+Wkatg+dk+vls k
  GAY39658.1  14 VPPGFRFHPTEEELVGYYLKRKINSLKIDL-DVIIDIDLYKIEPWDIQArcnLGYDEQNEWYFFSHKDRKYPTGTRTNRATAAGFWKATGRDKAVLS-K 110
                 69****************************.99**************953432233677**************************************.9 PP

         NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                 ++l+g++ktLvfykgrap+g+ktdW+mheyrl
  GAY39658.1 111 NKLIGMRKTLVFYKGRAPNGSKTDWIMHEYRL 142
                 99****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    
DQKRSSMDQL ESSVPPGFRF HPTEEELVGY YLKRKINSLK IDLDVIIDID LYKIEPWDIQ  60
ARCNLGYDEQ NEWYFFSHKD RKYPTGTRTN RATAAGFWKA TGRDKAVLSK NKLIGMRKTL  120
VFYKGRAPNG SKTDWIMHEY RLQTSENGPI QASYSVFIFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71930.11e-74NAC family protein