PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY39685.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ZF-HD
Protein Properties Length: 209aa    MW: 23899 Da    PI: 8.9417
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY39685.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer932.6e-292272459
  ZF-HD_dimer  4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59
                 ++YkeC+kNhAas+Ggha DGC+Efmp        ++l+CaACgCHRnFHRrev  
   GAY39685.1 22 INYKECMKNHAASIGGHANDGCCEFMPR-----ADDSLTCAACGCHRNFHRREVRG 72
                 68*************************9.....3479***************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MDLSLVPYKH QRPHPQQEPN IINYKECMKN HAASIGGHAN DGCCEFMPRA DDSLTCAACG  60
CHRNFHRREV RGQLLPQPKR LLLFKDPTKL VGAVDRYDEY DRRSETPERE EVNLNVCPPG  120
NVGPATGKSK RQRTKFTQEQ KDKMLEFAER IGWRMQRQDD VALNQFCNEV GVKRHVLKVW  180
MHNNKNASHR RKDESASQSP TEAAPPAAA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1128133KSKRQR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.16e-52ZF-HD family protein