PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY39828.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family FAR1
Protein Properties Length: 175aa    MW: 19701.1 Da    PI: 9.1712
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY39828.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR162.11.6e-1952137291
        FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                 +Y++Y+k+ GF v++++skk   +g     tf C ++g+++++ ++    +r++++t+tgC+ak+   +++dgkw+v +l leHnH l+p
  GAY39828.1  52 YYKAYGKQKGFPVKRRTSKKG-SDGILRYVTFACGRSGTSRSNPSN---FSRSQTNTKTGCNAKVGGCLDEDGKWQVRTLILEHNHGLNP 137
                 8**************999887.899999*************99988...8999999******************************9975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
MKDLEKEGLV ILKDDGLEGN VDEFENVEDV EKRVDEPAFG ISFDSADEMF TYYKAYGKQK  60
GFPVKRRTSK KGSDGILRYV TFACGRSGTS RSNPSNFSRS QTNTKTGCNA KVGGCLDEDG  120
KWQVRTLILE HNHGLNPGKS MYFRCNRNSS SHVKRQLETN DRAGKKLLNM MMSHS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.16e-14FAR1 family protein