PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY39902.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family GATA
Protein Properties Length: 319aa    MW: 34943.1 Da    PI: 7.7529
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY39902.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA534.6e-17245279135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 Cs+C +  Tp+WR gp g+ktLCnaCG++y++ +l
  GAY39902.1 245 CSHCLSQRTPQWRAGPLGPKTLCNACGVRYKSGRL 279
                 *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MDFCRNVAVS GDQYQQDQVL SPSSIPPSSS SNLALADPLD DLFPAHTTEV DVSLEWLSIF  60
VEDCLSSSGI CLPASELPTK NNAAATTAAP SPKPLQQQQQ QKASTTTTPS PPPSLEKFVV  120
PGKARSKRKR ASSTAKLTQT STSLSSLTTG CWTTTHNNHP ADTQLFHSDD PPLLQVQQAF  180
WLADSQLIFP KKETTNTNAI NTNSNKKAKA NDGDEEEEAK EEETEIGKEV EVVQQQQQQQ  240
QGRRCSHCLS QRTPQWRAGP LGPKTLCNAC GVRYKSGRLL PEYRPAKSPT FVSYLHSNSH  300
KKVLEMRMAL MPSPSSLPK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24050.12e-34GATA family protein