PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY39953.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB_related
Protein Properties Length: 273aa    MW: 30370.7 Da    PI: 5.7665
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY39953.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.12.3e-1469107646
                      HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      ++E++l+++++++lG++ W++Ia +++ gRt++++k++w++
       GAY39953.1  69 PDEEDLILRLHRLLGNR-WSLIAGRIP-GRTDNEIKNYWNT 107
                      89***************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MRNPSSSSSS DGTKKITPCC SKVGIKKGPW TPEEDEILSN YIKREGEGYC RLRWMNYLRP  60
SIKRGHIAPD EEDLILRLHR LLGNRWSLIA GRIPGRTDNE IKNYWNTRLR KKLISQGINP  120
TTHKPLIFNQ VVHDQLASSS STSNPNTPSL EIMEEAGVSS THQAAAANFT TNYNIPIDGG  180
FMMGSLLPSS HGHGHNCIGD YIDNCDEDTF SSFLDSLVND DDFMNHINEQ QQQSSVSSYN  240
NIGTIDWEFA DVLSTKVGSD DQHGAAASLN DQL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13540.17e-66MYB family protein