PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY39954.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB_related
Protein Properties Length: 219aa    MW: 24281.8 Da    PI: 5.0109
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY39954.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.61.7e-141553646
                     HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                     ++E++l+++++++lG++ W++Ia +++ gRt++++k++w++
       GAY39954.1 15 PDEEDLILRLHRLLGNR-WSLIAGRIP-GRTDNEIKNYWNT 53
                     89***************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MNYLRPSIKR GHIAPDEEDL ILRLHRLLGN RWSLIAGRIP GRTDNEIKNY WNTRLRKKLI  60
SQGINPTTHK PLIFNQVVHD QLASSSSTSN PNTPSLEIME EAGVSSTHQA AAANFTTNYN  120
IPIDGGFMMG SLLPSSHGHG HNCIGDYIDN CDEDTFSSFL DSLVNDDDFM NHINEQQQQS  180
SVSSYNNIGT IDWEFADVLS TKVGSDDQHG AAASLNDQL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13540.12e-43MYB family protein