PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY39962.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family B3
Protein Properties Length: 132aa    MW: 15100.9 Da    PI: 10.7318
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY39962.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3438e-141396183
                EEEE-..-HHHHTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEE CS
          B3  1 ffkvltpsdvlksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFk 83
                f k+lt+ d +++  +++  k ++++   g  ++  ++   ede+g++W ++li+rk++ +  v+++GW++Fv++++Lk  D v+F 
  GAY39962.1 13 FSKTLTKTDINNK--FSVKSKSLASFppfG-AQTYAQDFNAEDEEGKKWLFRLIIRKGKHKkPVISAGWRSFVRQKKLKIDDKVLFF 96
                5566655555544..577777777778854.44566799**************996666556*****************99998886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    
MLKMGKTNEK CLFSKTLTKT DINNKFSVKS KSLASFPPFG AQTYAQDFNA EDEEGKKWLF  60
RLIIRKGKHK KPVISAGWRS FVRQKKLKID DKVLFFKEQN EAEIATGGKY KIKVQKAVKV  120
FKAIMGYVPC MG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33860.11e-12ARF family protein