PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY40360.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB_related
Protein Properties Length: 286aa    MW: 32216 Da    PI: 9.4836
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY40360.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.46.8e-13126170347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+++++ +  ++G+g+W+ I+r     +t+ q+ s+ qky
       GAY40360.1 126 PWTEEEHKRFLMGLIKYGKGDWRNISRNYVISKTPTQVASHAQKY 170
                      8*****************************789***********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
METLYPASYM SNSSNWFLQD SSRSTSWTRE ENKRFESALA IYSESTPDRW IKVAAMIPGK  60
TVLDVIKQYK ELEEDVSDIE AGRVPIPGYL SSSFTLELVS ESDYDANRKR TLVAKSSDHE  120
RKKGVPWTEE EHKRFLMGLI KYGKGDWRNI SRNYVISKTP TQVASHAQKY FIRQLSGGKD  180
KRRPSIHDIT TGNLTNSVSS DNHKPSSFDQ SNVIPAQQKS FGTPKVGLEW TDSNNGAVMA  240
SDSTQSNMLM PSAFEFGSHG LKLQGQNLYA TTAYHGAHVK PRNPFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11280.11e-96MYB family protein