PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY40377.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

WOX

Protein Properties

Length: 193aa MW: 22462 Da PI: 6.7465

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY40377.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	64.1	1.9e-20	29	90	1	57
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++ R+++t+eq+++L +lF + r+ps++++++++++l +++ ++V++WFqN++a+e++ GAY40377.1 29 KCGRWNPTSEQVKVLTDLFTSgLRTPSTDQIQKISTQLsfygKIESKNVFYWFQNHKARERQ 90 568***************99************************************97 PP
2	Wus_type_Homeobox	113.4	1.1e-36	29	92	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++ RW+Pt+eQ+k+L++l++sGlrtP++++iq+i+++L+ yGkie+kNVfyWFQN+kaRerqk+ GAY40377.1 29 KCGRWNPTSEQVKVLTDLFTSGLRTPSTDQIQKISTQLSFYGKIESKNVFYWFQNHKARERQKR 92 678***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 193 aa Download sequence
MDERISGFYV KAGHVRAGNG NDNSDTGTKC GRWNPTSEQV KVLTDLFTSG LRTPSTDQIQ 60 KISTQLSFYG KIESKNVFYW FQNHKARERQ KRRKVSVDYD HQKDLIRHVD KISSPKHYVE 120 FHNSHMHVAG EAHDEPERVI ETLQLFPLNS FDDQESEKMR MHGDEFKEEG TTFSYTIGTE 180 MDHPPLDLRL NFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11260.1	5e-70	WOX family protein