PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY40455.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

MYB

Protein Properties

Length: 285aa MW: 31388.9 Da PI: 6.5167

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY40455.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.3	1.8e-18	27	72	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W+++Ed l+++v+q+G+++W+ I++ ++ gR++k+c++rw + GAY40455.1 27 KGSWSPQEDATLIKLVEQHGPRNWSMISSGIP-GRSGKSCRLRWCNQ 72 799***************************.*********985 PP
2	Myb_DNA-binding	54.2	3.2e-17	81	123	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+ Ed ++++a++ +G++ W+tIar ++ gRt++ +k++w++ GAY40455.1 81 PFTPAEDSIIIQAHAVHGNK-WATIARSLP-GRTDNAIKNHWNST 123 89****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 285 aa Download sequence
MMISTTSSSS MNNNSTNSNS NNNDRIKGSW SPQEDATLIK LVEQHGPRNW SMISSGIPGR 60 SGKSCRLRWC NQLSPTVQHR PFTPAEDSII IQAHAVHGNK WATIARSLPG RTDNAIKNHW 120 NSTLRRKRMA ELSSASSESN SVMMKRPGFE NNISSAESDS DSGGIKRQCL RVSQEHDSYN 180 VEAGIVGPET LLTLSPPGES VVLGGSGGEK VEDEEKLKIN KECDGDGDGG KIEKEKGEDR 240 CTVDMEMEES CLFTIMRRMI AEEVRNQFDG LRAQAGLRFS VQKDT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G23290.1	5e-53	MYB family protein