PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY40507.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 339aa    MW: 38202.2 Da    PI: 4.5296
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY40507.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.95.2e-1878128155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 ++y+GVr++  +g+WvAeIr+p   + r  r +lg+f +a eAa a+++a+++++g
  GAY40507.1  78 CDYRGVRQRT-WGKWVAEIREP---N-RgNRLWLGTFPSAVEAALAYDHAARAMYG 128
                 68*****999.**********8...2.359***********************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MAIQSKDSSP SLMMPLSSDR KRKRRDGVNV AETLERWRRY NESLESGNGE DKPMRRVPAK  60
GSKKGCMKGK GGPENGRCDY RGVRQRTWGK WVAEIREPNR GNRLWLGTFP SAVEAALAYD  120
HAARAMYGPC ARLNLPDVSR LNESSKDSDS TTSSNQSEIE DAKVKNDARE AESKIIAQPE  180
AELLSSPVKP KAKDEAEDNE KYYWGEQLDC KPEARDEPIL GSICDVKPET GDERKDATGI  240
DWLEGYDWSK DEMFDVNDLL DLLDNNPLCG SEQQSELSYY NLQAGSLDQS QFGYEKPLDP  300
FFQLRNPDME LPVGVNYAEH GASDYGLQFL KEEESDFGF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12025RKRKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05410.23e-42ERF family protein