PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY41028.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NAC
Protein Properties Length: 139aa    MW: 16481.9 Da    PI: 10.8637
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY41028.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM40.77.1e-13279955128
         NAM  55 ekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                  +++yfF++ +kk+ +g+r    + +g+W+     k v+s+ +++++g kk + + k ++p   +  W+mhey+l
  GAY41028.1  27 GEDLYFFTRLKKKSVNGSRIDHRVGTGTWQGEDVGKVVVSRnSRKKIGFKKRFRYEKDKSPY--NGCWIMHEYSL 99 
                 4678******************99******9999999988867788*********9666666..99*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    
MRTENLYGSK ELWQIWRQFG RLDLEYGEDL YFFTRLKKKS VNGSRIDHRV GTGTWQGEDV  60
GKVVVSRNSR KKIGFKKRFR YEKDKSPYNG CWIMHEYSLN PSLLPQNLRS SDLVLCRIRK  120
NGEPRQPGRK IQGKRESRA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.24e-11NAC family protein