PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY41031.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

GATA

Protein Properties

Length: 118aa MW: 12868 Da PI: 10.6297

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY41031.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	58.1	1.2e-18	17	51	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C C+tt TplWR gp g+++LCnaCG++yrk+++ GAY41031.1 17 CIDCHTTRTPLWRGGPAGPRSLCNACGIRYRKTKK 51 889*****************************875 PP

Sequence ? help Back to Top
Protein Sequence Length: 118 aa Download sequence
MMKSSPAGTF NEMNKSCIDC HTTRTPLWRG GPAGPRSLCN ACGIRYRKTK KLALLGRDKG 60 RAQKRKRKYS SNNNNHKGAT KLGISLKAGL MVVVGSDMGE EEQAAILLMS LSYGCLYA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49300.1	1e-27	GATA family protein