PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY41205.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

HSF

Protein Properties

Length: 162aa MW: 18329.6 Da PI: 9.1172

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY41205.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	117.1	1.1e-36	33	124	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+y++++d++++++isw+++g++fvv++++ fa+++Lp+yFkh+nf+SFvRQLn+YgFkkv ++ weF+++ F++g+++ll++i+ GAY41205.1 33 FLTKTYQLVDDQAIDDVISWNKDGTTFVVWNPTIFARDLLPRYFKHNNFSSFVRQLNTYGFKKVVPDR---------WEFSNDCFRRGEQQLLREIQ 120 9***************************************************************99.........****************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+k GAY41205.1 121 RRKI 124 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 162 aa Download sequence
MTPPPTAMEQ NGDSTPSPTT TASDSQRSMP TPFLTKTYQL VDDQAIDDVI SWNKDGTTFV 60 VWNPTIFARD LLPRYFKHNN FSSFVRQLNT YGFKKVVPDR WEFSNDCFRR GEQQLLREIQ 120 RRKIQSAATA QPVTVAVPAV VPVAKPIVSP SNSGEEQRER PV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62020.1	1e-61	HSF family protein