PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY41234.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

ARR-B

Protein Properties

Length: 594aa MW: 64268.9 Da PI: 7.7865

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY41234.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	80.9	1.5e-25	165	218	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kp++ Wt LH+rF++a++++ G ekA+Pk+ile+m+v+gLt+e+v+SHLQkYR+ GAY41234.1 165 KPKVAWTDSLHNRFLQAIRHI-GLEKAVPKKILEFMNVPGLTRENVASHLQKYRI 218 799****************.******************************6 PP
2	Myb_DNA-binding	33.4	1.1e-10	167	217	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 + +WT ++ ++++a++ G + +k+I + m+ g+t++++ s++qky+ GAY41234.1 167 KVAWTDSLHNRFLQAIRHIGLEkaVPKKILEFMNvPGLTRENVASHLQKYR 217 568***********************************************7 PP
3	Response_reg	59.5	1.8e-20	6	90	26	109
EEEESSHHHHHHHHHHHH.ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHHH CS Response_reg 26 vaeaddgeealellkekd.pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeelvk 109 v +++ + eal++++ ++ +Dl+++D+ mp+m+G+el kei+ee +lp++v+++ + e+ + +al G+ ++ Kp +p++l + GAY41234.1 6 VVTVTRPVEALATVRIQRdIDLVVTDLHMPEMNGIELQKEINEEFTHLPVMVMSSDDRESVIMKALASGVAFYILKPLNPDDLKN 90 5678888999999976666***************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 594 aa Download sequence
MGRLFVVTVT RPVEALATVR IQRDIDLVVT DLHMPEMNGI ELQKEINEEF THLPVMVMSS 60 DDRESVIMKA LASGVAFYIL KPLNPDDLKN VWQYAMTYKK AKSISIDEIG SFELAGFSAG 120 KFSLDDIVSR SSVNERNKNN KDSKRKASKK DKGKQTKQNA TAPKKPKVAW TDSLHNRFLQ 180 AIRHIGLEKA VPKKILEFMN VPGLTRENVA SHLQKYRIFL KRVAEQGASA MGKNLALRSS 240 FAAGHVSMML QEAHEFSQVR DKQQQMRTSA FLPGYGSGVS ALNGTTFGSI GFPSLGASSS 300 SSVPQPGLMG NQANFPQLLF GNTRNPLYKA NSAGTTCGSS GSNNMEANPL SRGGLAAGRM 360 NQMYQQKSQL RPNPYDNDNI GASSSKGFGI SGWSSSSNTS GLDQNMGTIR NNTYSNYAGI 420 RLNDDGELIP AGQTSLINGS GLNGGYGLIT GTSGIMANAA FGHLTPGASS SSARFDNATY 480 QIPSAFAGVN EQENTSMLSQ LSSQQQYGPG NNAQNDFTNF APINNASVNG NTAQPERFGE 540 GIDLVDLLFD PSDYQFLFQL LEIEDVSDPE LSSIADPLNV YYPSFDQNAS SITN

Sequence ? help Back to Top

Protein Sequence Length: 594 aa Download sequence

MGRLFVVTVT RPVEALATVR IQRDIDLVVT DLHMPEMNGI ELQKEINEEF THLPVMVMSS  60
DDRESVIMKA LASGVAFYIL KPLNPDDLKN VWQYAMTYKK AKSISIDEIG SFELAGFSAG  120
KFSLDDIVSR SSVNERNKNN KDSKRKASKK DKGKQTKQNA TAPKKPKVAW TDSLHNRFLQ  180
AIRHIGLEKA VPKKILEFMN VPGLTRENVA SHLQKYRIFL KRVAEQGASA MGKNLALRSS  240
FAAGHVSMML QEAHEFSQVR DKQQQMRTSA FLPGYGSGVS ALNGTTFGSI GFPSLGASSS  300
SSVPQPGLMG NQANFPQLLF GNTRNPLYKA NSAGTTCGSS GSNNMEANPL SRGGLAAGRM  360
NQMYQQKSQL RPNPYDNDNI GASSSKGFGI SGWSSSSNTS GLDQNMGTIR NNTYSNYAGI  420
RLNDDGELIP AGQTSLINGS GLNGGYGLIT GTSGIMANAA FGHLTPGASS SSARFDNATY  480
QIPSAFAGVN EQENTSMLSQ LSSQQQYGPG NNAQNDFTNF APINNASVNG NTAQPERFGE  540
GIDLVDLLFD PSDYQFLFQL LEIEDVSDPE LSSIADPLNV YYPSFDQNAS SITN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27070.1	3e-46	ARR-B family protein